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Repository gsc_filter_cells
Name: gsc_filter_cells
Owner: artbio
Synopsis: Filter single cell RNAseq data on library depth and number of detected genes
Filter single cell RNAseq datasets on 
- Absolute numbers of aligned reads or of detected genes
and / or
- relatively to percentile threshold in the datasets, for numbers of aligned reads or of detected genes
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/main/tools/gsc_filter_cells
Link to this repository: https://toolshed.g2.bx.psu.edu/view/artbio/gsc_filter_cells/0b27f323c80b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/artbio/gsc_filter_cells
Type: unrestricted
Revision: 4:0b27f323c80b
This revision can be installed: True
Times cloned / installed: 305

Contents of this repository

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Name Description Version Minimum Galaxy Version
on total aligned reads and/or number of detected genes 4.3.1+galaxy1 21.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.