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Repository text_processing
Owner: bgruening
Synopsis: High performance text processing tools using the GNU coreutils, sed, awk and friends.
That repository contains all kind of different text processing tools.

  * awk - The AWK programmning language ( http://www.gnu.org/software/gawk/ )
  * sed - Stream Editor ( https://www.gnu.org/software/sed/ )
  * grep - Search files ( http://www.gnu.org/software/grep/ )
  * sort_columns - Sorting every line according to there columns
  * GNU Coreutils programs ( http://www.gnu.org/software/coreutils/ ):
  * sort - sort files * join - join two files, based on common key field.
  * cut - keep/discard fields from a file * unsorted_uniq - keep unique/duplicated lines in a file
  * sorted_uniq - keep unique/duplicated lines in a file * head - keep the first X lines in a file
  * tail - keep the last X lines in a file

  Originally known as "Unix Tools" and developed from Assaf Gordon @ Greg Hannon's lab ( http://hannonlab.cshl.edu )
  in Cold Spring Harbor Laboratory, it is now hosted under https://github.com/bgruening/galaxytools/tree/master/tools/text_processing
  and open for contributions. It will also replace several smaller sed, sort and uniq wrappers, developed over the time.
  Repository-Maintainer: Björn Grüning
Content homepage: https://www.gnu.org/software/
Type: unrestricted
Revision: 18:d698c222f354
This revision can be installed: True
Times cloned / installed: 55925

Contents of this repository

Name Description Version Minimum Galaxy Version
assuming sorted input file 1.1.1 16.01
reverse a file (reverse cat) 1.1.0 16.01
in a specific column 1.1.3 16.01
lines from a dataset (tail) 1.1.0 16.01
(combine multiple files) 1.1.1 16.01
according to their columns 1.1.0+galaxy0 16.01
parts of text 1.1.4 16.01
columns from a table (cut) 1.1.0 16.01
two files 1.1.2 16.01
data in ascending or descending order 1.1.1 16.01
occurrences of each record 1.1.0 16.01
in entire line 1.1.2 16.01
with recurring lines 1.1.0 16.01
with sed 1.1.1 16.01
with awk 1.1.2 16.01
columns from a table 1.1.1 16.01
lines from a dataset (head) 1.1.0 16.01
(grep) 1.1.1 16.01
tail-to-head (cat) 0.1.1 16.01

Categories
Text Manipulation - Tools for manipulating data