Repository unified_genotyper
Name: unified_genotyper
Owner: devteam
Synopsis: Unified Genotyper SNP and indel caller
A variant caller which unifies the approaches of several disparate
callers.  Works for single-sample and multi-sample data.  The user can choose from
several different incorporated calculation models.
Content homepage: https://www.broadinstitute.org/gatk/
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/gatk/unified_genotyper
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/unified_genotyper/66dd4d4c1743
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/unified_genotyper
Type: unrestricted
Revision: 0:66dd4d4c1743
This revision can be installed: True
Times cloned / installed: 2927
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_gatk_1_4 revision ec95ec570854 owned by devteam
Repository package_samtools_0_1_18 revision 171cd8bc208d owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
gatk 1.4 package
samtools 0.1.18 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
SNP and indel caller 0.0.6 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis