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Repository ashlar
Name: ashlar
Owner: perssond
Synopsis: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration Usage
Ashlar performs fast, high-quality stitching of microscopy images. It also co-registers multiple rounds of cyclic imaging for methods such as CyCIF and CODEX. Ashlar can read image data directly from BioFormats-supported microscope vendor file formats as well as a directory of plain TIFF files. Output is saved as pyramidal, tiled OME-TIFF.
Content homepage: https://github.com/labsyspharm/ashlar
Development repository: https://github.com/ohsu-comp-bio/ashlar
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/perssond/ashlar/b3054f3d42b2
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/perssond/ashlar
Type: unrestricted
Revision: 0:b3054f3d42b2
This revision can be installed: True
Times cloned / installed: 298

Contents of this repository

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Name Description Version Minimum Galaxy Version
Alignment by Simultaneous Harmonization of Layer/Adjacency Registration 1.13.0.6 17.09

Categories
Imaging - Utilities to support imaging