Repository ctat_star_fusion
Owner: trinity_ctat
Synopsis: STAR-Fusion uses the STAR aligner to identify candidate fusion transcripts supported by Illumina reads.
STAR-Fusion is a component of the Trinity Cancer Transcriptome Analysis Toolkit (CTAT). STAR-Fusion uses the STAR aligner to identify candidate fusion transcripts supported by Illumina reads. STAR-Fusion further processes the output generated by the STAR aligner to map junction reads and spanning reads to a reference annotation set. -
Type: unrestricted
Revision: 0:a530fa18e9e8
This revision can be installed: True
Times cloned / installed: 99

Contents of this repository

Name Description Version Minimum Galaxy Version
Fusion-finding Pipeline Using the STAR Aligner 1.0.1 17.05

Assembly - Tools for working with assemblies
RNA - Utilities for RNA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis