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Repository srst2
Name: srst2
Owner: iuc
Synopsis: Wrapper for the srst2 tool suite: SRST2
SRST2 tool is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Development repository: https://github.com/katholt/srst2
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/srst2
Type: unrestricted
Revision: 0:f9a0855c792d
This revision can be installed: True
Times cloned / installed: 97

Contents of this repository

Name Description Version Minimum Galaxy Version
Short Read Sequence Typing for Bacterial Pathogens 0.2.0+galaxy0 20.01

Categories
Metagenomics - Tools enabling the study of metagenomes