Repository shorah_amplicon
Name: shorah_amplicon
Owner: iuc
Synopsis: Reconstruct haplotypes using ShoRAH in amplicon mode
ShoRAH is an open source project for the analysis of next generation sequencing data. It is designed to analyse genetically heterogeneous samples. Its tools are written in different programming languages and provide error correction, haplotype reconstruction and estimation of the frequency of the different genetic variants present in a mixed sample.
Content homepage: https://github.com/cbg-ethz/shorah/blob/master/README.md
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/shorah
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/shorah_amplicon/fc46049f6c27
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/shorah_amplicon
Type: unrestricted
Revision: 0:fc46049f6c27
This revision can be installed: True
Times cloned / installed: 233

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
with ShoRAH in amplicon mode 1.1.3+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis