Repository suite_trinity
Name: suite_trinity
Owner: iuc
Synopsis: Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Trinity represents a method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data

https://github.com/trinityrnaseq/trinityrnaseq
Content homepage: https://github.com/trinityrnaseq/trinityrnaseq
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/suite_trinity/6393be3f3eb8
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/suite_trinity
Type: repository_suite_definition
Revision: 27:6393be3f3eb8
This revision can be installed: True
Times cloned / installed: 855
Dependencies of this repository

Repository dependencies - Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Repository trinity_contig_exn50_statistic revision be3f26533209 owned by iuc
Repository trinity_abundance_estimates_to_matrix revision bcc5f03f1900 owned by iuc
Repository trinity_gene_to_trans_map revision 964b7efe2639 owned by iuc
Repository trinity_run_de_analysis revision eafea3083352 owned by iuc
Repository trinity_samples_qccheck revision 3a4ac03d1266 owned by iuc
Repository trinity_super_transcripts revision bdede464821e owned by iuc
Repository trinity_analyze_diff_expr revision 3f4094b6a565 owned by iuc
Repository trinity_filter_low_expr_transcripts revision 1fdb25a8384d owned by iuc
Repository trinity_align_and_estimate_abundance revision c2b82a94493e owned by iuc
Repository describe_samples revision e3b16fd7dd08 owned by iuc
Repository trinity revision d2bc35f3d1c5 owned by iuc
Repository trinity_define_clusters_by_cutting_tree revision 5192f657f305 owned by iuc

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA