Repository suite_trinity
Name: suite_trinity
Owner: iuc
Synopsis: Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Trinity represents a method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data

https://github.com/trinityrnaseq/trinityrnaseq
Content homepage: https://github.com/trinityrnaseq/trinityrnaseq
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/suite_trinity/acc2f30cdfa8
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/suite_trinity
Type: repository_suite_definition
Revision: 30:acc2f30cdfa8
This revision can be installed: True
Times cloned / installed: 998
Dependencies of this repository

Repository dependencies - Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Repository describe_samples revision 3b36efd62b3e owned by iuc
Repository trinity_run_de_analysis revision 24e94d84adc9 owned by iuc
Repository trinity_align_and_estimate_abundance revision 2fb4ee002432 owned by iuc
Repository trinity revision 8f1c3df4dd49 owned by iuc
Repository trinity_abundance_estimates_to_matrix revision ba3720d7e68b owned by iuc
Repository trinity_define_clusters_by_cutting_tree revision 65e7dea767ea owned by iuc
Repository trinity_stats revision b2ce45417d9e owned by iuc
Repository trinity_gene_to_trans_map revision 7c7fbf13aadd owned by iuc
Repository trinity_analyze_diff_expr revision 9ff3765e7172 owned by iuc
Repository trinity_samples_qccheck revision 04bb8bb7c198 owned by iuc
Repository trinity_super_transcripts revision 5c1fc038df6b owned by iuc
Repository trinity_contig_exn50_statistic revision 870ac06dff8e owned by iuc
Repository trinity_filter_low_expr_transcripts revision a35cba31d904 owned by iuc

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA