Repository suite_trinity
Name: suite_trinity
Owner: iuc
Synopsis: Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Trinity represents a method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data

https://github.com/trinityrnaseq/trinityrnaseq
Content homepage: https://github.com/trinityrnaseq/trinityrnaseq
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/suite_trinity/117c64ee558d
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/suite_trinity
Type: repository_suite_definition
Revision: 26:117c64ee558d
This revision can be installed: True
Times cloned / installed: 746
Dependencies of this repository

Repository dependencies - Trinity tools to assemble transcript sequences from Illumina RNA-Seq data.
Repository trinity_filter_low_expr_transcripts revision a5ec0e79a93a owned by iuc
Repository trinity_gene_to_trans_map revision 7e3849997c91 owned by iuc
Repository trinity_contig_exn50_statistic revision beafdd47f8cf owned by iuc
Repository trinity_run_de_analysis revision ab87da55fe61 owned by iuc
Repository trinity_define_clusters_by_cutting_tree revision 8928f2226e40 owned by iuc
Repository trinity_samples_qccheck revision 50ba95fec4a2 owned by iuc
Repository trinity_align_and_estimate_abundance revision 00719b8004c9 owned by iuc
Repository describe_samples revision 0f294e370b95 owned by iuc
Repository trinity_analyze_diff_expr revision 2a89673cec86 owned by iuc
Repository trinity_abundance_estimates_to_matrix revision 442e3696c634 owned by iuc
Repository trinity_super_transcripts revision 9c545f1c1a4e owned by iuc
Repository trinity revision 3772d9a10f27 owned by iuc

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA