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Repository usearch_map_reads_to_otus
Name: usearch_map_reads_to_otus
Owner: qfab
Synopsis: Maps read sequences to OTUs - GVL
Maps read sequences that have been identified as non-chimeric OTU cluster representatives by the UCHIME tool. This is an intermediate step to generate an OTU table. Map Reads to OTU is part of the USEARCH Tool Suite.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/qfab/usearch_map_reads_to_otus/87603fcae838
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/qfab/usearch_map_reads_to_otus
Type: unrestricted
Revision: 2:87603fcae838
This revision can be installed: True
Times cloned / installed: 444
Dependencies of this repository

Repository dependencies - This requires the metagenomics datatype definitions (e.g. the rabund format).
Repository metagenomics_datatypes revision edf752012785 owned by qfab (prior install required)

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Maps read sequences to OTUs 1.1 any

Categories
Metagenomics - Tools enabling the study of metagenomes