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Repository openms_falsediscoveryrate
Name: openms_falsediscoveryrate
Owner: galaxyp
Synopsis: Wrapper for the OpenMS suite tool: FalseDiscoveryRate
OpenMS is an open-source software C++ library for LC/MS data management and analyses. It offers an infrastructure for the rapid development of mass spectrometry related software.
https://www.openms.de/
Content homepage: https://www.openms.de/
Development repository: https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_falsediscoveryrate/518b1730cf2a
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_falsediscoveryrate
Type: unrestricted
Revision: 2:518b1730cf2a
This revision can be installed: True
Times cloned / installed: 1022
Dependencies of this repository

Repository dependencies - Required proteomics dependencies.
Repository proteomics_datatypes revision 300fc3aa6954 owned by iracooke

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Estimates the false discovery rate on peptide and protein level using decoy searches. 2.1.0 any

Datatypes
extension type mimetype subclass
mzxml galaxy.datatypes.proteomics:MzXML application/xml
traml galaxy.datatypes.proteomics:TraML application/xml
idxml galaxy.datatypes.proteomics:IdXM application/xml
txt galaxy.datatypes.data:Text
tabular galaxy.datatypes.tabular:Tabular
txt galaxy.datatypes.data:Text
fasta galaxy.datatypes.sequence:Fasta
mgf galaxy.datatypes.proteomics:Mgf
mzml galaxy.datatypes.proteomics:MzML application/xml
trafoxml galaxy.datatypes.xml:GenericXml application/xml
traml galaxy.datatypes.proteomics:TraML application/xml
msp galaxy.datatypes.proteomics:Msp
html galaxy.datatypes.text:Html text/html
tabular galaxy.datatypes.tabular:Tabular
fasta galaxy.datatypes.sequence:Fasta
tabular galaxy.datatypes.tabular:Tabular
consensusxml galaxy.datatypes.proteomics:ConsensusXML application/xml
xml galaxy.datatypes.xml:GenericXml application/xml
mzq galaxy.datatypes.proteomics:MzQuantML application/xml
grid galaxy.datatypes.data:Grid
pepxml galaxy.datatypes.proteomics:PepXml application/xml
png galaxy.datatypes.images:Png image/png
qcml galaxy.datatypes.xml:GenericXml application/xml
featurexml galaxy.datatypes.proteomics:FeatureXML application/xml
html galaxy.datatypes.text:Html text/html
txt galaxy.datatypes.data:Text
mzid galaxy.datatypes.proteomics:MzIdentML application/xml
txt galaxy.datatypes.data:Text

Categories
Proteomics - Tools enabling the study of proteins