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Repository pieplot_macs
Name: pieplot_macs
Owner: alenail
Synopsis: Make a pie chart for mapped MACS peaks
Content homepage: https://github.com/fraenkel-lab/galaxytools/tree/master/pieplot_macs
Link to this repository: https://toolshed.g2.bx.psu.edu/view/alenail/pieplot_macs/8dae9fdd2afe
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/alenail/pieplot_macs
Type: unrestricted
Revision: 16:8dae9fdd2afe
This revision can be installed: True
Times cloned / installed: 472
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Repository package_python_2_7_numpy_1_9 revision f24fc0b630fc owned by iuc (prior install required)
Repository package_freetype_2_5_2_matplotlib_fix revision 26586565bc22 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_python_2_7_10 revision bd7165ea6526 owned by iuc (prior install required)
Repository package_atlas_3_10 revision 98c017ec230d owned by iuc (prior install required)
Repository package_python_2_7_10 revision bd7165ea6526 owned by iuc (prior install required)
Repository package_python_2_7_numpy_1_9 revision f24fc0b630fc owned by iuc (prior install required)
Repository package_python_2_7_10 revision bd7165ea6526 owned by iuc (prior install required)
Repository package_libpng_1_6_7 revision 588666932a32 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
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Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)
Repository package_gdbm_1_11 revision ed2537bccffc owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)

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Name Version Type
matplotlib 1.4 package
pandas 0.16 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Peaks are assigned to the closest gene and then categorized according to their location at different genomic regions (promoter, intron, exon, or after the gene). Sites >10kb away from any gene are considered intergenic. 0.1 any

Categories
ChIP-seq - Tools for analyzing and manipulating ChIP-seq data.