Repository ctat_lncrna
Name: ctat_lncrna
Owner: trinity_ctat
Synopsis: lncRNA discovery from RNA-Seq data
This tool uses slncky for lncRNA discovery from RNA-Seq data. slncky filters a high-quality set of noncoding transcripts, discovers lncRNA orthologs, and characterizes conserved lncRNA evolution.
Content homepage: https://github.com/NCIP/Trinity_CTAT_galaxy/wiki
Development repository: https://github.com/NCIP/Trinity_CTAT_galaxy
Link to this repository: https://toolshed.g2.bx.psu.edu/view/trinity_ctat/ctat_lncrna/a940c4a36a43
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/trinity_ctat/ctat_lncrna
Type: unrestricted
Revision: 0:a940c4a36a43
This revision can be installed: True
Times cloned / installed: 218

Contents of this repository

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Name Description Version Minimum Galaxy Version
Filters a high-quality set of lncRNA from reconstructed RNA-seq data 1.0.0 17.05

Categories
Assembly - Tools for working with assemblies
RNA - Utilities for RNA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis