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Repository dante

Name: dante

Owner: petr-novak

Synopsis: Domain based Annotation of Transposable Elements

Detailed description:

Domain based Annotation of Transposable Elements

Content homepage: http://repeatexplorer.org/?page_id=832

Development repository: https://github.com/kavonrtep/dante

Link to this repository: https://toolshed.g2.bx.psu.edu/view/petr-novak/dante/f0663cdbae66

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/petr-novak/dante

Type: unrestricted

Revision: 30:f0663cdbae66

This revision can be installed: True

Times cloned / installed: 588

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Domain based ANnotation of Transposable Elements - DANTE View tool metadata	Tool for annotation of transposable elements based on the similarity to conserved protein domains database.	2.5.1	16.01
Protein Domains Filter View tool metadata	Tool for filtering of gff3 output from DANTE. Filtering can be performed based domain type and alignment quality.	2.5.1	16.01
Extract Domains Nucleotide Sequences View tool metadata	Tool to extract nucleotide sequences of protein domains found by DANTE	2.5.1	16.01
Convert dante gff3 to tab delimited file View tool metadata		2.5.1	16.01
Summarize gff3 output from DANTE View tool metadata		2.5.1	16.01