|Mauve is a system for constructing multiple genome alignments in the presence|
of large-scale evolutionary events such as rearrangement and inversion.
Multiple genome alignments provide a basis for research into comparative
genomics and the study of genome-wide evolutionary dynamics.
Mauve has been developed with the idea that a multiple genome aligner should
require only modest computational resources. It employs algorithmic
techniques that scale well in the lengths of sequences being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute, while
a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
However, the current algorithm’s compute time (progressiveMauve) scales
cubically in the number of genomes to align, making it unsuitable for
datasets containing more than 50-100 bacterial genomes.
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/progressivemauve
|Name||Description||Version||Minimum Galaxy Version|
|constructs multiple genome alignments||2015_02_13.0||16.01|