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Repository progressivemauve
Owner: iuc
Synopsis: Mauve/ProgressiveMauve Multiple Sequence Aligner
Mauve is a system for constructing multiple genome alignments in the presence
of large-scale evolutionary events such as rearrangement and inversion.
Multiple genome alignments provide a basis for research into comparative
genomics and the study of genome-wide evolutionary dynamics.

Mauve has been developed with the idea that a multiple genome aligner should
require only modest computational resources. It employs algorithmic
techniques that scale well in the lengths of sequences being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute, while
a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
However, the current algorithm’s compute time (progressiveMauve) scales
cubically in the number of genomes to align, making it unsuitable for
datasets containing more than 50-100 bacterial genomes.

http://darlinglab.org/mauve/
Type: unrestricted
Revision: 4:4d869208bd52
This revision can be installed: True
Times cloned / installed: 594

Contents of this repository

Name Description Version Minimum Galaxy Version
constructs multiple genome alignments 2015_02_13.0 16.01
2015_02_13.1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis