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Repository raceid_inspecttrajectory
Owner: iuc
Synopsis: Wrapper for the RaceID pipeline tool: Lineage Branch Analysis using StemID
RaceID is a method for cell type identification from single-cell RNA-seq data by unsupervised learning. An initial clustering is followed by an outlier identification based on a backgorund model of combined technical and biological variability in single-cell RNA-seq data obtained by quantification with unique molecular identifiers. StemID permits subsequent inference of a lineage tree based on clusters, i.e. cell types, identified by RaceID.
Type: unrestricted
Revision: 8:df8e4e54d367
This revision can be installed: True
Times cloned / installed: 419

Contents of this repository

Name Description Version Minimum Galaxy Version
inspects branches of a lineage tree 0.2.3+galaxy2 21.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.