Repository package_tophat2_2_0_9
Name: package_tophat2_2_0_9
Owner: devteam
Synopsis: Contains a tool dependency definition that downloads and compiles version 2.0.9 of TopHat2.
TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns
RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read
aligner Bowtie, and then analyzes the mapping results to identify splice junctions
between exons.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_tophat2_2_0_9
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/package_tophat2_2_0_9/8549fd545473
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/package_tophat2_2_0_9
Type: tool_dependency_definition
Revision: 0:8549fd545473
This revision can be installed: True
Times cloned / installed: 3902
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
tophat2 2.0.9 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions