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Repository lumpy_sv
Name: lumpy_sv
Owner: artbio
Synopsis: Find structural variations
This tool takes as an input a sorted bam alignment of paired-end sequencing reads.
It extracts discordant paired-end alignments and split-read alignments,
and generates a vcf file containing structural variation calls
Content homepage: http://artbio.fr
Type: unrestricted
Revision: 5:6ae3a402b9af
This revision can be installed: True
Times cloned / installed: 314

Contents of this repository

Name Description Version Minimum Galaxy Version
find structural variants 1.2.2 16.01

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA