Repository get_hrun
Name: get_hrun
Owner: iuc
Synopsis: Annotate indel variants with homopolymer context
Takes a VCF file and annotates indel variants with the size of their 
homopolymer context. Accounts for variants that are not fully left aligned.
Content homepage: https://github.com/galaxyproject/tools-iuc/tree/master/tools/get_hrun
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/get_hrun
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/get_hrun/84f70ce0b830
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/get_hrun
Type: unrestricted
Revision: 0:84f70ce0b830
This revision can be installed: True
Times cloned / installed: 154

Contents of this repository

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Name Description Version Minimum Galaxy Version
Annotate indel variants with homopolymer context 1.0+galaxy0 20.01

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA