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Repository samtools_sort
Name: samtools_sort
Owner: iuc
Synopsis: Sort alignments by leftmost coordinates or read name.
This tool uses the SAMtools toolkit to sort alignments by leftmost coordinates or read names.
http://samtools.sourceforge.net/samtools.shtml

Repository-Maintainer: Björn Grüning
Repository-Development: https://github.com/bgruening/galaxytools
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/samtools/samtools_sort
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_sort/38ea74bd4054
Type: unrestricted
Revision: 2:38ea74bd4054
This revision can be installed: True
Times cloned / installed: 551
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_samtools_0_1_19 revision 95d2c4aefb5f owned by devteam

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
samtools 0.1.19 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
a BAM file 1.0.2 any

Categories
Fastq Manipulation - Tools for manipulating fastq data
SAM - Tools for manipulating alignments in the SAM format