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Repository scanpy_find_cluster
Owner: ebi-gxa
Synopsis: Wrapper for the scanpy-scripts tool suite: Scanpy FindCluster
Scanpy is a scalable toolkit for analyzing single-cell gene expression data.  It includes
preprocessing, visualization, clustering, pseudotime and trajectory inference and differential
expression testing. Scanpy-scripts provides a set of command-line wrapper scripts that are
composed from Scanpy API for easy execution of common analysis.
Content homepage:
Type: unrestricted
Revision: 29:2ccd9f9e2cd0
This revision can be installed: True
Times cloned / installed: 1449

Contents of this repository

Name Description Version Minimum Galaxy Version
based on community detection on KNN graph 1.8.1+galaxy9 18.01

Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
RNA - Utilities for RNA