Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository scanpy_find_cluster
Owner: ebi-gxa
Synopsis: Wrapper for the scanpy-scripts tool suite: Scanpy FindCluster
Scanpy is a scalable toolkit for analyzing single-cell gene expression data.  It includes
preprocessing, visualization, clustering, pseudotime and trajectory inference and differential
expression testing. Scanpy-scripts provides a set of command-line wrapper scripts that are
composed from Scanpy API for easy execution of common analysis.
Content homepage: https://scanpy.readthedocs.io
Type: unrestricted
Revision: 23:621d7d7a605f
This revision can be installed: True
Times cloned / installed: 493

Contents of this repository

Name Description Version Minimum Galaxy Version
based on community detection on KNN graph 1.7.2+galaxy0 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
RNA - Utilities for RNA