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Repository data_manager_gemini_database_downloader
Owner: iuc
Synopsis: GEMINI: a flexible framework for exploring genome variation
The intent of GEMINI (GEnome MINIing) is to provide a simple, flexible, and powerful framework for exploring genetic variation for
personal and medical genetics. GEMINI is unique in that it integrates genetic variation (from VCF files) with a wealth of genome
annotations into a unified database framework. Using this integrated database as the analysis framework, we aim to leverage the
expressive power of SQL for data analysis, while attempting to overcome the fundamental challenges associated with using databases for
very large (e.g. 1,000,000 variants times 1,000 samples yields one billion genotypes) datasets. In addition, by defining sample
relationships with a PED file, GEMINI allows one to explore and test for variants that meet specific inheritance models (e.g.,
recessive, dominant, etc.).
Type: unrestricted
Revision: 5:b4b2b284230a
This revision can be installed: True
Times cloned / installed: 2573

Contents of this repository

Name Description Version Minimum Galaxy Version
the annotation files required by the GEMINI suite of tools 16.01

Name Version Data Tables
data_manager_gemini_download 0.0.1 gemini_versioned_databases

Data Managers - Utilities for Managing Galaxy's built-in data cache