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Repository spades_plasmidspades
Owner: iuc
Synopsis: Extract and assembly plasmids from WGS data.
plasmidSPAdes is a pipeline for assembling plasmid data sets. Ihas the potential to massively increase the throughput of plasmid sequencing and to provide information about plasmids in thousands of sequenced bacterial genomes by re-assembling their genomes, identifying their plasmids and supplementing the corresponding GenBank entries with the plasmid annotations
Type: unrestricted
Revision: 5:6aad515a5270
This revision can be installed: True
Times cloned / installed: 334

Contents of this repository

Name Description Version Minimum Galaxy Version
extract and assembly plasmids from WGS data 3.15.4+galaxy1 20.01

Assembly - Tools for working with assemblies
RNA - Utilities for RNA
Metagenomics - Tools enabling the study of metagenomes