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Repository porechop
Name: porechop
Owner: iuc
Synopsis: Porechop - Finding and removing adapters from Oxford Nanopore reads
Porechop is a tool for finding and removing adapters from Oxford Nanopore reads.
Adapters on the ends of reads are trimmed off, and when a read has an adapter in
its middle, it is treated as chimeric and chopped into separate reads. Porechop
performs thorough alignments to effectively find adapters, even at low sequence
identity. Porechop also supports demultiplexing of Nanopore reads that were
barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/porechop
Type: unrestricted
Revision: 2:5f76b20953e5
This revision can be installed: True
Times cloned / installed: 348

Contents of this repository

Name Description Version Minimum Galaxy Version
adapter trimmer for Oxford Nanopore reads 0.2.4 20.01

Categories
Fasta Manipulation - Tools for manipulating fasta data
Fastq Manipulation - Tools for manipulating fastq data