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Repository xcms_plot_chromatogram
Name: xcms_plot_chromatogram
Owner: lecorguille
Synopsis: [Metabolomics][W4M][LC-MS] XCMS R Package - Preprocessing - Plot base peak intensity chromatogram (BPI) and total ion chromatogram (TIC)
Plot base peak intensity chromatogram (BPI) and total ion chromatogram (TIC)
Part of the W4M project: http://workflow4metabolomics.org
XCMS: http://www.bioconductor.org/packages/release/bioc/html/xcms.html 
Content homepage: https://github.com/sneumann/xcms
Development repository: https://github.com/workflow4metabolomics/tools-metabolomics/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/lecorguille/xcms_plot_chromatogram/024974037c4e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_plot_chromatogram
Type: unrestricted
Revision: 13:024974037c4e
This revision can be installed: True
Times cloned / installed: 978

Repository README files - may contain important installation or license information

Readme files
Changelog/News -------------- .. _News: https://bioconductor.org/packages/release/bioc/news/xcms/NEWS **Version 3.12.0+galaxy* - 03/03/2020** - UPGRADE: upgrade the xcms version from 3.6.1 to 3.12.0 (see XCMS News_) **Version 3.6.1.0 - 03/09/2019** - UPGRADE: upgrade the xcms version from 3.4.4 to 3.6.1 (see XCMS News_) **Version 3.4.4.0 - 08/02/2019** - UPGRADE: upgrade the xcms version from 3.0.0 to 3.4.4 (see XCMS News_) **Version 3.0.0.0 - 07/03/2018** - NEW: This new tool will plot base peak intensity chromatogram (BPI) and total ion chromatogram (TIC) from xcms experience. It will replace the one created by xcmsSet and retcor tools.
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository no_unzip_datatype revision 7800ba9a4c1e owned by lecorguille
Repository rdata_xcms_datatypes revision 544f6d2329ac owned by lecorguille

Contents of this repository

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Name Description Version Minimum Galaxy Version
Plots base peak intensity chromatogram (BPI) and total ion current chromatogram (TIC) from MSnbase or xcms experiment(s) 3.12.0+galaxy0 16.01

Categories
Metabolomics - Tools for use in the study of Metabolomics