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Repository schicexplorer_schicconsensusmatrices
Owner: iuc
Synopsis: Wrapper for scHiCExplorer: scHicConsensusMatrices
Sequencing techniques that probe the 3D organization of the genome generate large amounts of
data whose processing, analysis and visualization is challenging. Here, we present scHiCExplorer,
a set of tools for the analysis and visualization of single-cell chromosome conformation data. scHiCExplorer
facilitates the creation of contact matrices, correction of contacts, merging,
reordering or chromosomes, dimension reduction and clustering of cells.
Repository-Maintainer: Joachim Wolff
https://github.com/joachimwolff/schicexplorer
Type: unrestricted
Revision: 1:18bdb745b787
This revision can be installed: True
Times cloned / installed: 148

Contents of this repository

Name Description Version Minimum Galaxy Version
creates per cluster one average matrix 4.0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.
Visualization - Tools for visualizing data