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Repository vcfannotategenotypes
Name: vcfannotategenotypes
Owner: devteam
Synopsis: Annotate genotypes in a VCF dataset using genotypes from another VCF dataset.
Annotates genotypes in the first file with genotypes in the second
adding the genotype as another flag to each sample filed in the first file. Annotation-tag
is the name of the sample flag which is added to store the annotation.  also adds
a ''has\_variant'' flag for sites where the second file has a variant.
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfannotategenotypes
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/vcfannotategenotypes/84959112d9a6
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfannotategenotypes
Type: unrestricted
Revision: 4:84959112d9a6
This revision can be installed: True
Times cloned / installed: 3077

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Annotate genotypes in a VCF dataset using genotypes from another VCF dataset 1.0.0_rc3+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA