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Repository anndata_export
Name: anndata_export
Owner: iuc
Synopsis: Wrapper for the anndata tool suite: Export AnnData and loom files
AnnData provides a scalable way of keeping track of data together with learned annotations. It is used within Scanpy, for which it was initially developed. Loompy is a similar method of dealing with hd5 files, containing layers of matrices with the same row and column attributes. Information on loompy is is available at: <http://loompy.org>
Content homepage: https://anndata.readthedocs.io
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/anndata_export/0cb889db0910
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/anndata_export
Type: unrestricted
Revision: 10:0cb889db0910
This revision can be installed: True
Times cloned / installed: 655

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Interconvert AnnData and Loom formats 0.7.5+galaxy1 16.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis