Repository mirdeep2_and_targetspy_dh
Name: mirdeep2_and_targetspy_dh
Owner: david-hoover
Synopsis: Finding miRNA in NGS data and finding the targets for those miRNA
This is a fix of the same repo from nikhil-joshi in the main toolshed.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/david-hoover/mirdeep2_and_targetspy_dh/17e442abb3de
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/david-hoover/mirdeep2_and_targetspy_dh
Type: unrestricted
Revision: 0:17e442abb3de
This revision can be installed: True
Times cloned / installed: 185

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Find miRNA candidates using output from mapping step 1.0.0 any
Mapping using a bowtie index 1.0.0 any
Build index for Bowtie alignment 1.0.0 any
Find targets for miRNAs 1.0.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis