Repository unafold
Name: unafold
Owner: hogart
Synopsis: Galaxy Tool wrapper for UNAFold
This is the Galaxy wrapper for the UNAFold (http://mfold.rna.albany.edu/?q=DINAMelt/software). UNAFold software was developed for nucleic acid folding and hybridization prediction (doi: 10.1007/978-1-60327-429-6_1, doi: 10.1093/nar/gki591).
Note: the UNAFold requires a big amount of RAM - e.g. the folding of 43 kb RNA eats near 30 GB of memory. So, after the installation of this wrapper you will need to modify the job_conf.xml of your Galaxy instance properly. Also, please be sure that zip datatype is registered as binary datatype in your Galaxy instance.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/hogart/unafold
Type: unrestricted
Revision: 5:5f95a9afe2ee
This revision can be installed: True
Times cloned / installed: 152

Contents of this repository

Name Description Version Minimum Galaxy Version
Folding of RNA sequences using UNAFold 0.0.1 any

Categories
RNA - Utilities for RNA