| This package will be soon deprecated and replaced by a new version, resulting from the merge of this one and the one from crs4: http://toolshed.g2.bx.psu.edu/view/crs4/prokka
See the prokka website at http://www.vicbioinformatics.com/software.prokka.shtml Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales well to 64 core SMP systems. It produces GFF3, GBK and SQN files that are ready for editing in Sequin and ultimately submitted to Genbank/DDJB/ENA. |
| Name | Version | Type | |
|---|---|---|---|
| aragorn | 1.2.36 | package | |
| blast+ | 2.2.26+ | package | |
| hmmer | 3.1b1 | package | |
| infernal | 1.1rc4 | package | |
| package_barrnap_0_1 | 0.1 | package | |
| prodigal | 2.60 | package | |
| prokka | 1.7 | package | |
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| prokaryotic genome annotation | 0.2 | any | |