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Repository je_markdupes
Name: je_markdupes
Owner: gbcs-embl-heidelberg
Synopsis: Wrapper for Je tool: Je-MarkDuplicates
Content homepage: http://gbcs.embl.de/Je
Development repository: https://github.com/gbcs-embl/Je/tree/master/src/galaxy
Link to this repository: https://toolshed.g2.bx.psu.edu/view/gbcs-embl-heidelberg/je_markdupes/663a671f92fe
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/gbcs-embl-heidelberg/je_markdupes
Type: unrestricted
Revision: 10:663a671f92fe
This revision can be installed: True
Times cloned / installed: 525

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
to filter BAM files for read duplicates taking UMIs into account 1.2.1 16.01

Categories
Fastq Manipulation - Tools for manipulating fastq data
SAM - Tools for manipulating alignments in the SAM format