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Repository drep_dereplicate
Owner: iuc
Synopsis: Wrapper for the dRep application dRep dereplicate.
dRep can rapidly and accurately compare a list of genomes in a pair-wise manner. This allows identification of groups of organisms that share similar DNA content in terms of Average Nucleotide Identity (ANI). The default options for drep dereplicate use checkm method lineage_wf that uses pplacer which can require more than 40 Gb of RAM.
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Type: unrestricted
Revision: 6:cafcc13990ee
This revision can be installed: True
Times cloned / installed: 602

Contents of this repository

Name Description Version Minimum Galaxy Version
De-replicate a list of genomes 3.5.0+galaxy0 20.01

Metagenomics - Tools enabling the study of metagenomes