The Pretext (Paired REad TEXTure) suite include two tools: PretextMap and PretextSnapshot. PretextMap allows to convert SAM/BAM files into genome contacts maps. On the other hand, PretextSnapShot is a image generator for Pretext contact maps. |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/pretext_map
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
converts SAM or BAM files into genome contact maps | 0.1.8+galaxy2 | 20.01 |