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Repository scmap_index_cluster
Name: scmap_index_cluster
Owner: ebi-gxa
Synopsis: Wrapper for the scmap tool suite: Scmap index clusters
scmap: A tool for unsupervised projection of single cell RNA-seq data
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/scmap_index_cluster/9b60d5972dbd
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_index_cluster
Type: unrestricted
Revision: 3:9b60d5972dbd
This revision can be installed: True
Times cloned / installed: 430

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
calculates centroids of each cell type and merges them into a single table 1.6.0+galaxy1 18.01

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.
RNA - Utilities for RNA
Statistics - Tools for generating statistics
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis