Repository sortmerna
Name: sortmerna
Owner: bonsai
Synopsis: SortMeRNA - Fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
SortMeRNA is a software designed to rapidly filter ribosomal RNA fragments from metatransriptomic data produced by next-generation sequencers. It is capable of handling large RNA databases and sorting out all fragments matching to the database with high accuracy and specificity.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bonsai/sortmerna/2e7f0da431e3
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bonsai/sortmerna
Type: unrestricted
Revision: 0:2e7f0da431e3
This revision can be installed: True
Times cloned / installed: 669
Dependencies of this repository

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Name Version Type
sortmerna 1.7 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Fast and accurate filtering of ribosomal RNAs in metatranscriptomic data 1.0 any
Merges two fastq paired-reads files into one file. 1.0 any

Categories
Metagenomics - Tools enabling the study of metagenomes
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data