Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository samtools_fastx
Name: samtools_fastx
Owner: iuc
Synopsis: Extract reads
Extract reads from a SAM or BAM file, optionally filtering by flags in the
input file.
Content homepage: http://www.htslib.org/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fastx
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/samtools_fastx/b906586a6596
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/samtools_fastx
Type: unrestricted
Revision: 5:b906586a6596
This revision can be installed: True
Times cloned / installed: 1470

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
extract FASTA or FASTQ from alignment files 1.20+galaxy2 22.05

Categories
SAM - Tools for manipulating alignments in the SAM format