Repository rdp_multiclassifier
Owner: qfab
Synopsis: Rapid assignment of rRNA sequences into the new bacterial taxonomy - GVL
RDP MultiClassifier uses RDP na├»ve Bayesian Classifier to classify single or multiple files containing 16S rRNA and Fungal LSU genes sequences. It outputs the assignment count for each taxon in hierarchy order in different columns, one for each sample. The hierarchy assignment count output, which is similar to an OTU table from clustering results.
This version of the RDP MulitClassifier allows the completion of the
intermediate OTU table generated by the USEARCH - Map Reads to OTUs tool
of the metagenomics workflow.
Type: unrestricted
Revision: 0:a73ae72b47aa
This revision can be installed: True
Times cloned / installed: 405
Dependencies of this repository

Name Version Type
rdp_multi_classifier_1.1 1.1 package

Contents of this repository

Name Description Version Minimum Galaxy Version
Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy 1.1 any

Categories
Metagenomics - Tools enabling the study of metagenomes