While Kraken classifies reads to multiple levels in the taxonomic tree, Bracken allows estimation of abundance at a single level using those classifications (e.g. Bracken can estimate abundance of species within a sample). |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_bracken_database
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
bracken database builder | 2.5+galaxy1 | 19.01 |
Name | Version | Data Tables |
---|---|---|
bracken_build_database | 0.0.1 | bracken_databases |