Repository revision
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Repository prokka
Name: prokka
Owner: crs4
Synopsis: Rapid annotation of prokaryotic genomes
Prokka is a software tool to rapidly annotate bacterial, archaeal and viral
genomes, and produce output files that require only minor tweaking to submit
to GenBank/ENA/DDBJ.
Content homepage: http://github.com/tseemann/prokka
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/crs4/prokka/95505a9fa26f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/crs4/prokka
Type: unrestricted
Revision: 0:95505a9fa26f
This revision can be installed: True
Times cloned / installed: 3365
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_blast_plus_2_2_26 revision 869ee5651b61 owned by iuc
Repository package_hmmer_3_1 revision 007c736bf7e8 owned by lionelguy
Repository package_aragorn_1_2_36 revision f09e2902e6ed owned by iuc
Repository package_infernal_1_1rc4 revision b9cc978bc83b owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
aragorn 1.2.36 package
blast+ 2.2.26+ package
hmmer 3.1b1 package
infernal 1.1rc4 package
prokka 1.7 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Prokaryotic Annotation 1.0.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis