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Repository w4mcorcov
Name: w4mcorcov
Owner: eschen42
Synopsis: OPLS-DA Contrasts of Univariate Results
SIMCA OPLS-DA S-PLOT "work-alike" for W4M data
Type: unrestricted
Revision: 14:90708fdbc22d
This revision can be installed: True
Times cloned / installed: 436

Repository README files - may contain important installation or license information

# w4mcorcov_galaxy_wrapper

Planemo-based galaxy-tool-wrapper to wrap a SIMCA® OPLS-DA® S-PLOT® "work-alike" tool.
This tool plots the correlation of each feature with the OPLS-DA projection of multivariate data for two classes of data against the covariance of the same.

The original plot which this tool emulates is described in:
> Wiklund, Susanne and Johansson, Erik and Sjöström, Lina and Mellerowicz, Ewa J. and Edlund, Ulf and Shockcor, John P. and Gottfries, Johan and Moritz, Thomas and Trygg, Johan (2008). Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models. In Analytical Chemistry, 80 (1), pp. 115–122. doi:10.1021/ac0713510

Contents of this repository

Name Description Version Minimum Galaxy Version
OPLS-DA Contrasts of Univariate Results 0.98.18 16.01

Metabolomics - Tools for use in the study of Metabolomics