|Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform.|
Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/stacks2_shortreads
|Name||Description||Version||Minimum Galaxy Version|
|fast cleaning of randomly sheared genomic or transcriptomic data||2.4+galaxy0||18.01|