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Repository amrplusplus_workflow
Name: amrplusplus_workflow
Owner: chrisd
Synopsis: Contains a workflow for analyzing metagenomic sequence data.
Development repository: https://github.com/cdeanj/galaxytools/tree/master/workflows/amrplusplus
Link to this repository: https://toolshed.g2.bx.psu.edu/view/chrisd/amrplusplus_workflow/0eae27b15aa0
Type: unrestricted
Revision: 8:0eae27b15aa0
This revision can be installed: True
Times cloned / installed: 27
Dependencies of this repository

Repository dependencies - A meta-package of tools needed to run the amrPlusPlus workflow
Repository bwa revision 546ada4a9f43 owned by devteam
Repository trimmomatic revision f8a9a5eaca8a owned by pjbriggs
Repository samtools_flag_filter_1_2 revision 97bb72be07f9 owned by brenninc
Repository samtools_sort revision a430da4f04cd owned by devteam
Repository bam_to_sam revision af7c50162f0b owned by devteam
Repository snpfinder revision 7073825e4338 owned by chrisd
Repository rarefaction_analyzer revision 5ec8b052e389 owned by chrisd
Repository resistome_analyzer revision c9fbf44a96f7 owned by chrisd
Repository xy_plot revision 23657fcaaa5c owned by devteam
Repository package_bwa_0_7_12 revision 6af9b24ddeee owned by iuc
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc (prior install required)
Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc
Repository package_samtools_1_2 revision f6ae3ba3f3c1 owned by iuc
Repository package_r_2_11_0 revision 5824d2b3bc8b owned by devteam

Categories
Metagenomics - Tools enabling the study of metagenomes