Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository gap_all_glycan_tools
Owner: chrisb
Synopsis: GAP glycan tools
Type: unrestricted
Revision: 1:0a5e0df17054
This revision can be installed: True
Times cloned / installed: 411
Dependencies of this repository

Name Version Type
python_for_glycan_tools 1.0 package

Contents of this repository

Name Description Version Minimum Galaxy Version
Extracts LinearCode format from an msa formatted file 0.4 any
Converts a LinearCode formatted glycan to a KCF format 0.3 any
Detects glycan file format 0.3 any
using the new converter at RINGS 0.5.2 any
Convert between multiple glycan formats using the RINGS SOAP service 0.3 any
Converts a KCF formatted glycan to an image 0.3 any
from trees in newick-like format 0.2 any
provides binary fingerprints for glycans using RINGS fingerprinter tool 0.2 any
using MCAW 0.2 any
for analytics 0.1 any
Find significant subgraphs in glycans with Glycan Miner 0.2 any
the union, intersection and relative difference of glycan sets 0.3.10 any
files for comparison 0.1 any
download msa entries from CFG 0.3 any
searches KEGG for related database entries 0.3.2 any
using the KEGG database 0.4.0 any
download kcf entries from KEGG 0.3 any
download glycan metadata (and xls) from CFG 0.1.1 any
and append or extend fragments on fuzzy linear code 0.3 any
rename the ENTRY tag in KCF file 0.3 any
Keep only ENTRY, NODE, EDGE content 0.3 any

Categories
Web Services - Tools enabling access to web services