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Repository spades_coronaspades
Owner: iuc
Synopsis: SARS-CoV-2 de novo genome assembler.
Due to an increased interest in coronavirus research, a coronavirus assembly mode for SPAdes assembler has been developed (a.k.a coronaSPAdes).
It enables assembly of full-length coronaviridae genomes from the transcriptomic and metatranscriptomic data.
Type: unrestricted
Revision: 0:7004279ff8b7
This revision can be installed: True
Times cloned / installed: 180

Contents of this repository

Name Description Version Minimum Galaxy Version
SARS-CoV-2 de novo genome assembler 3.15.3+galaxy0 20.01

Assembly - Tools for working with assemblies
RNA - Utilities for RNA
Metagenomics - Tools enabling the study of metagenomes