The settings for name, version and type from a contained tool configuration file's requirement tag does not match the information for the following tool dependency definitions in the tool_dependencies.xml file, so these tool dependencies have no relationship with any tools within this repository.
* name: phyml, type: package, version: 3.1
Repository phylogenetic_analysis
Name: phylogenetic_analysis
Owner: crique
Synopsis: Phylogenetic analysis using PhyML
PhyML is a software package which primary task that is to estimate maximum likelihood phylogenies from alignments of nucleotide or amino acid sequences. It provides a wide range of options that were designed to facilitate standard phylogenetic analyses. (Guindon, S., & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic biology, 52(5), 696-704)
Link to this repository: https://toolshed.g2.bx.psu.edu/view/crique/phylogenetic_analysis/ac4a2f2b998b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/crique/phylogenetic_analysis
Type: unrestricted
Revision: 1:ac4a2f2b998b
This revision can be installed: True
Times cloned / installed: 239
Dependencies of this repository

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Name Version Type
phyml 3.1 package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Phylogeny software based on the maximum-likelihood principle 0.1.0 any

Categories
Phylogenetics - Tools for performing phylogenetic analysis