| This program loads two sqlite databases (mzsqlite and genomic mapping sqlite files) and calculates the genomic coordinates of the peptides provided as input. This outputs bed file for peptides.
Input: Peptide list file, mzsqlite sqlite DB file, and genomic mapping sqlite DB file Output: Tabular BED file with all the columns mzsqlite: https://toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.0.0 genome mapping sqlite: https://toolshed.g2.bx.psu.edu/view/galaxyp/translate_bed/038ecf54cbec P.S. : Requires sqlite |
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| Get genomic location/coordinate of peptides using mzsqlite DB and genomic mapping sqlite DB | 0.1.1 | 16.01 | |