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Repository cd_hit
Name: cd_hit
Owner: iuc
Synopsis: Cluster or compare biological sequence datasets
CD-HIT is a widely used program for clustering and comparing protein or nucleotide sequences. CD-HIT is very fast and can handle extremely large databases. CD-HIT helps to reduce sequence redundancy and improve the performance of other sequence analyses.
Content homepage: http://weizhongli-lab.org/cd-hit/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/cdhit
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/cd_hit/7807800a3d03
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/cd_hit
Type: unrestricted
Revision: 1:7807800a3d03
This revision can be installed: True
Times cloned / installed: 427

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Cluster or compare biological sequence datasets 4.8.1+galaxy0 20.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Fasta Manipulation - Tools for manipulating fasta data